Yes, that will be a "automatic" restriction on your CDL-A license.
If you insist on worrying about that, go ahead. But all the fleets switched to automatics about eight years ago. Only specialized operations will have them.
A CDL is required to drive any of the following vehicles:
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If you obtain your CDL in a Automatic truck is that the only truck you are allowed to drive?
CDL:
Commercial Driver's License (CDL)
A CDL is required to drive any of the following vehicles: